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Reading Plexon files in Linux or Mac
Updates (12/10 /2011): Plexon now offers a mex extension for Matlab which compiles on Linux and Mac. I have a Python .plx file reader available, and Huang Xin has a better one based on ctypes, part of...
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Reading .plx files in Mac/Linux: a Python script
Update (12/10/2011): Huang Xin has written better Python script based on ctypes, part of RealTimeElectrophy. I posted a few days ago on solutions for reading .plx files on Mac/Linux, and was kind of...
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Evaluating IDEs for scientific Python
* Last updated May 27th, 2013 * Python is a general purpose scripting language that can be used for statistical analysis, numeric work, machine learning, etc. With packages like SciPy, matplotlib,...
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ipython and ipython notebook for Matlab users
Following my post on IDEs for scientific Python, several commenters mentioned using some combination of their favorite text editor and ipython rather than a dedicated IDE. ipython is an interactive...
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Load pickle files in Matlab
It’s easy enough to load .mat files in Python via the scipy.io.loadmat function. But what about loading .pickle files into Matlab? That’s easy enough by calling a system command in Matlab, like so:...
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Theano: numerical computation in Python
A Theano evaluation graph Theano is a very interesting numeric library for Python that I covered briefly a few years ago. Coming from the machine learning group at Université de Montréal – i.e. Yoshua...
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Calling R from Matlab – flat file communication
In the last post I showed how to fit a Bayesian hierarchical model in R to estimate experimental parameters. Our main data analysis pipeline uses Matlab, and we’d like to integrate these two...
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